Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 4
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      2        0    5.5
Qui1     Qui    33.3      9        0   14.0
Qui2     Qui    36.4     11        0   20.5
Qui3     Qui    23.1     13        0   18.5
Qui4     Qui    85.7      7        0   12.5
Rio1     Rio   100.0      3        0   10.0
Rio2     Rio   100.0      1        0    5.0
Rio3     Rio   100.0      4        0    8.0
Rio4     Rio   100.0      3        0    7.0