Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 42
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     2.9     34        0    3.6
Qui1     Qui     1.7     58        1    7.6
Qui2     Qui     0.0     32        1    5.1
Qui3     Qui     0.0     27        2    5.0
Qui4     Qui     0.0     30        1    4.9
Rio1     Rio    15.8     57        0    7.9
Rio2     Rio     0.0     19        1    3.6
Rio3     Rio     0.0     28        0    3.5
Rio4     Rio    13.5     37        0    6.5