Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 9
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

41 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    20.5    190        0    8.2
Qui1     Qui     4.8     83        0    4.4
Qui2     Qui    11.2     98        0    4.2
Qui3     Qui     4.9    143        0    5.9
Qui4     Qui     5.7    122        0    5.1
Rio1     Rio    34.8    112        0    5.1
Rio2     Rio    49.0    151        0    6.1
Rio3     Rio    36.9    122        0    5.7
Rio4     Rio    38.9    126        0    5.3