Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

17 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    35.1     37        0    8.1
Qui1     Qui    56.4     39        0    6.7
Qui2     Qui    52.3     44        0    6.6
Qui3     Qui    34.3     67        0    9.6
Qui4     Qui    50.0     36        0    7.6
Rio1     Rio    44.0     50        0    7.6
Rio2     Rio    41.7     36        0   10.0
Rio3     Rio    47.8     23        0    7.4
Rio4     Rio    40.0     40        0    9.7