Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 21
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      1        0    0.2
Qui1     Qui    88.9     18        0    3.5
Qui2     Qui    73.3     15        0    5.0
Qui3     Qui    91.4     93        0   13.3
Qui4     Qui    45.5     11        0    3.8
Rio1     Rio    71.6     88        0   12.4
Rio2     Rio    62.3     53        0    7.6
Rio3     Rio    59.3     86        0   10.5
Rio4     Rio    63.3     49        0    6.1