Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0      2        0    4.0
Qui1     Qui    38.9     18        0   29.5
Qui2     Qui    69.2     13        0   25.5
Qui3     Qui    75.0      4        0    7.0
Qui4     Qui    70.6     17        0   30.0
Rio1     Rio    33.3      3        0   10.0
Rio2     Rio    11.1      9        0   17.0
Rio3     Rio    22.2      9        0   22.5
Rio4     Rio     0.0      3        0   13.5