Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 2  [CpG-destroying: 1]
    130770622 A>G  Pum=0.071  Qui=0.8  Rio=0.0
    130770639 C>T  Pum=0.2  Qui=1.0  Rio=0.0

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    80.0      5        0   14.5
Qui1     Qui              0        1    5.0
Qui2     Qui     0.0      4        1    8.0
Qui3     Qui     0.0      4        1    7.0
Qui4     Qui     0.0      2        1    7.0
Rio1     Rio    66.7      6        0    8.5
Rio2     Rio    83.3      6        0   12.0
Rio3     Rio    83.3      6        0   12.0
Rio4     Rio    83.3      6        0    9.0