Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 1
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 1  [CpG-destroying: 0]
    126557116 G>T  Pum=0.0  Qui=0.886  Rio=0.022

1 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    60.0     10        0   12.0
Qui1     Qui     0.0     13        0   14.5
Qui2     Qui     0.0     11        0   11.0
Qui3     Qui    36.4     11        0   12.0
Qui4     Qui     0.0     10        0   10.0
Rio1     Rio   100.0     13        0   14.0
Rio2     Rio    70.0     10        0   10.0
Rio3     Rio    66.7      6        0    8.0
Rio4     Rio    94.1     17        0   17.0