Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 4
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    87.5      8        0   12.0
Qui1     Qui    50.0      4        1   10.0
Qui2     Qui    12.5      8        1   14.0
Qui3     Qui    36.4     11        0   19.5
Qui4     Qui    33.3      6        1   10.0
Rio1     Rio    80.0      5        0    8.0
Rio2     Rio   100.0      6        0   13.5
Rio3     Rio   100.0      4        0   12.0
Rio4     Rio   100.0      5        0   16.0