Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 29
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    53.1     64        0    7.0
Qui1     Qui    47.1     68        0    8.4
Qui2     Qui    51.6     64        0    8.5
Qui3     Qui    48.0    123        0    9.0
Qui4     Qui    38.5     78        0    6.6
Rio1     Rio    16.5     91        0    9.9
Rio2     Rio     5.8     52        0    6.7
Rio3     Rio    20.5     44        0    6.1
Rio4     Rio    17.8     73        0    7.9