Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

34 CpGs in target; 12 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     41        0    1.1
Qui1     Qui     2.1     97        0    3.8
Qui2     Qui     0.9    115        0    4.7
Qui3     Qui     1.4    146        0    5.4
Qui4     Qui    16.7     48        0    2.6
Rio1     Rio     6.6     76        0    3.1
Rio2     Rio    46.0    187        0    6.6
Rio3     Rio    10.0     50        1    3.2
Rio4     Rio     4.1     74        0    5.0