Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 11 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    94.5     55        0    5.9
Qui1     Qui    64.2     67        0    7.4
Qui2     Qui    41.3     46        0    7.6
Qui3     Qui    63.3     30        0    4.8
Qui4     Qui    89.7     29        0    5.2
Rio1     Rio    88.5     61        0    8.2
Rio2     Rio    91.9     62        0    8.6
Rio3     Rio    85.1     67        0    6.8
Rio4     Rio    80.4     46        0    8.7