Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 10
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

16 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    76.2    147        0   13.8
Qui1     Qui    47.8     90        0    9.4
Qui2     Qui    52.2    134        0   13.8
Qui3     Qui    48.4     93        0    9.7
Qui4     Qui    52.9     51        0    9.6
Rio1     Rio    75.8     91        0   10.9
Rio2     Rio    80.3     76        0    8.7
Rio3     Rio    77.2     79        0    9.5
Rio4     Rio    67.8    115        0   13.0