Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 29
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

40 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    25.6    180        0    6.7
Qui1     Qui     3.6     28        0    2.7
Qui2     Qui     0.9    114        0    5.1
Qui3     Qui     0.0     61        0    3.1
Qui4     Qui     0.0     69        0    3.5
Rio1     Rio    29.2    137        0    7.1
Rio2     Rio    35.6    101        0    4.6
Rio3     Rio    40.2    132        0    5.3
Rio4     Rio    42.1    214        0   11.5