Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 18
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    44.7     38        0    9.9
Qui1     Qui    60.6     33        0    8.8
Qui2     Qui    73.3     30        0    7.3
Qui3     Qui    83.3     24        0    7.9
Qui4     Qui    58.3     24        0    7.4
Rio1     Rio    46.7     30        0    9.6
Rio2     Rio    57.7     26        0    7.7
Rio3     Rio    40.0     30        0    7.8
Rio4     Rio    52.8     36        0    9.6