Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 35
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    26.5    117        1    8.2
Qui1     Qui    48.0    148        1    8.8
Qui2     Qui    28.0    161        0    9.2
Qui3     Qui    17.3    139        1   10.8
Qui4     Qui    46.6     88        1    7.1
Rio1     Rio     4.7    149        1   10.2
Rio2     Rio     3.4     87        1    6.0
Rio3     Rio     1.2     83        0    5.1
Rio4     Rio     3.3    123        1    8.2