Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 18
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

25 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     67        0    3.1
Qui1     Qui    19.6     46        0    2.9
Qui2     Qui    46.6     73        0    2.6
Qui3     Qui    59.4     64        0    4.1
Qui4     Qui    82.7     52        0    1.2
Rio1     Rio     3.0     67        0    4.9
Rio2     Rio     0.0     59        0    3.1
Rio3     Rio    18.2     66        0    4.0
Rio4     Rio     0.0     65        0    2.2