Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 25
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

38 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    89.5     95        1    6.7
Qui1     Qui    59.5    121        0    6.3
Qui2     Qui    46.2    117        0    8.4
Qui3     Qui    28.8    139        0    7.7
Qui4     Qui    91.4     81        0    4.7
Rio1     Rio    90.3    113        0    8.5
Rio2     Rio    96.6     59        0    5.4
Rio3     Rio    98.8     86        0    6.5
Rio4     Rio    89.2     74        0    7.1