Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

32 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    95.2    104        0    7.5
Qui1     Qui    45.9     85        0    5.7
Qui2     Qui    57.8     83        0    5.1
Qui3     Qui    55.3    114        0    6.5
Qui4     Qui    62.6     91        0    6.3
Rio1     Rio    93.7     95        0    6.9
Rio2     Rio    98.6     72        0    9.8
Rio3     Rio    96.2     53        0    5.3
Rio4     Rio    91.7    133        0    8.9