Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 9
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    16.7      6        0    9.3
Qui1     Qui     0.0     10        0    6.8
Qui2     Qui    41.7     12        0    9.6
Qui3     Qui   100.0      1        0    8.8
Qui4     Qui   100.0      5        0    2.7
Rio1     Rio     0.0      8        0    8.5
Rio2     Rio     0.0      5        0    8.0
Rio3     Rio     0.0      4        0    6.0
Rio4     Rio     0.0      2        0    5.8