Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 17
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    71.4     14        0    6.4
Qui1     Qui    50.0      6        0    5.9
Qui2     Qui    90.0     10        0    5.1
Qui3     Qui    93.3     15        0    8.2
Qui4     Qui    86.7     15        0    5.9
Rio1     Rio    78.6     14        0    8.6
Rio2     Rio    90.0     10        0    6.2
Rio3     Rio   100.0      3        0    4.5
Rio4     Rio    58.3     12        0    8.0