Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

35 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    12.1    322        1   10.4
Qui1     Qui     7.3     96        0    4.8
Qui2     Qui     2.0    200        0    5.8
Qui3     Qui     0.0    154        0    5.0
Qui4     Qui     0.0     26        0    1.2
Rio1     Rio    30.5    367        0   10.7
Rio2     Rio    30.1    209        0    7.1
Rio3     Rio    28.0    225        0    6.8
Rio4     Rio    34.8    230        0    7.3