Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 31
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

40 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     1.7     58        0    4.5
Qui1     Qui     1.1     92        1    4.9
Qui2     Qui    60.6    109        0    7.8
Qui3     Qui    61.5     65        0    7.9
Qui4     Qui    56.2     80        1    6.6
Rio1     Rio     0.0    109        0    8.7
Rio2     Rio     5.9     34        0    5.7
Rio3     Rio     0.0    121        0    7.3
Rio4     Rio     3.3    122        2    6.8