Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 8
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

8 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    44.8     29        0    8.7
Qui1     Qui    40.9     22        0    7.8
Qui2     Qui    64.4     45        0    7.8
Qui3     Qui    63.2     38        0   11.8
Qui4     Qui    48.1     27        0    7.2
Rio1     Rio    18.8     48        0   10.8
Rio2     Rio    70.4     27        0    8.7
Rio3     Rio    39.0     41        0    8.0
Rio4     Rio    41.7     24        0    7.7