Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

20 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     4.6     65        0    9.5
Qui1     Qui     0.0     78        0    5.4
Qui2     Qui     5.4     56        0    6.1
Qui3     Qui     3.8    104        0    7.9
Qui4     Qui    21.6    102        0    7.1
Rio1     Rio    42.4     59        0    6.7
Rio2     Rio    24.6     69        0    6.8
Rio3     Rio    41.0     61        0    6.1
Rio4     Rio    44.1     59        0    7.0