Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 31
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

16 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    81.2     69        0    5.9
Qui1     Qui    19.8     91        0    7.7
Qui2     Qui    37.0    100        0    6.8
Qui3     Qui    41.2     68        0    6.3
Qui4     Qui    50.0     78        0    6.3
Rio1     Rio    66.7    114        0    9.2
Rio2     Rio    77.7    103        0    6.8
Rio3     Rio    59.6     52        0    4.5
Rio4     Rio    71.4     70        0    5.0