Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 45
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

56 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    32.2     90        0    3.5
Qui1     Qui     6.7    164        0    5.4
Qui2     Qui     0.0     86        0    3.4
Qui3     Qui     0.0     82        0    5.5
Qui4     Qui    10.2     98        0    4.9
Rio1     Rio     0.9    111        0    4.7
Rio2     Rio     0.0      2        0    1.7
Rio3     Rio    28.3     60        0    2.6
Rio4     Rio    21.7     83        0    3.1