pos ref alt in_target n_oysters_with_alt alt_freq_Pum alt_freq_Qui alt_freq_Rio pop_differentiated cpg_destroying Pum1 Qui1 Qui2 Qui3 Qui4 Rio1 Rio2 Rio3 Rio4 38053001 A G True 1 0.067 0.0 False False 0.00/2 0.25/4 0.00/1 0.00/6 0.00/4 0.00/3 0.00/4 0.00/2 38053003 T A True 1 0.067 0.0 False False 0.00/2 0.25/4 0.00/1 0.00/6 0.00/4 0.00/1 0.00/3 0.00/5 0.00/2 38053004 A C True 1 0.062 0.0 False False 0.00/2 0.25/4 0.00/1 0.00/7 0.00/4 0.00/3 0.00/5 0.00/2 38053006 T A True 1 0.062 0.0 False False 0.00/2 0.25/4 0.00/1 0.00/7 0.00/4 0.00/3 0.00/5 0.00/2 38053008 T A True 1 0.067 0.0 False False 0.00/2 0.25/4 0.00/1 0.00/7 0.00/3 0.00/3 0.00/5 0.00/2 38053010 A T True 1 0.067 0.0 False False 0.00/2 0.25/4 0.00/1 0.00/7 0.00/3 0.00/4 0.00/5 0.00/2 38053034 A T True 1 0.0 0.071 False False 0.00/2 0.00/4 0.00/2 0.00/6 0.00/4 0.00/5 0.00/5 0.25/4 38053035 A C True 1 0.0 0.071 False False 0.00/2 0.00/4 0.00/2 0.00/6 0.00/4 0.00/5 0.00/5 0.25/4 38053070 A G True 2 0.0 0.059 0.286 False False 0.00/4 0.00/4 0.00/2 0.17/6 0.00/5 1.00/1 0.40/5 0.00/4 0.25/4 38053148 T C True 7 0.286 0.778 0.65 False False 0.29/7 0.43/7 1.00/4 1.00/4 1.00/3 1.00/3 0.43/7 0.40/5 1.00/5 38053149 G T True 1 0.0 0.0 0.062 False False 0.00/6 0.00/1 0.00/3 0.00/2 0.00/1 0.00/1 0.00/7 0.25/4 0.00/4 38053159 A T True 1 0.0 0.053 0.0 False False 0.00/6 0.00/7 0.00/4 0.25/4 0.00/4 0.00/4 0.00/8 0.00/5 0.00/5 38053160 A C True 1 0.0 0.053 0.0 False False 0.00/6 0.00/7 0.00/4 0.25/4 0.00/4 0.00/4 0.00/8 0.00/5 0.00/5 38053168 A T True 1 0.0 0.105 0.0 False False 0.00/6 0.12/8 0.25/4 0.00/3 0.00/4 0.00/5 0.00/8 0.00/5 0.00/5 38053181 A G True 1 0.0 0.053 0.0 False False 0.00/5 0.00/7 0.25/4 0.00/4 0.00/4 0.00/6 0.00/7 0.00/7 0.00/5 38053236 A C True 1 0.25 0.0 0.0 False False 0.25/4 0.00/7 0.00/7 0.00/5 0.00/6 0.00/7 0.00/7 0.00/9 0.00/3 38053238 A C True 1 0.25 0.0 0.0 False False 0.25/4 0.00/7 0.00/7 0.00/5 0.00/6 0.00/7 0.00/7 0.00/9 0.00/3 38053239 A C True 1 0.25 0.0 0.0 False False 0.25/4 0.00/7 0.00/7 0.00/5 0.00/6 0.00/8 0.00/7 0.00/9 0.00/3 38053241 A C True 1 0.25 0.0 0.0 False False 0.25/4 0.00/7 0.00/7 0.00/5 0.00/6 0.00/8 0.00/7 0.00/9 0.00/3 38053243 A C True 1 0.25 0.0 0.0 False False 0.25/4 0.00/7 0.00/7 0.00/5 0.00/6 0.00/8 0.00/7 0.00/9 0.00/3 38053245 A G True 6 0.48 0.571 False False 0.00/3 0.14/7 0.71/7 0.60/5 0.50/6 0.62/8 0.50/8 0.44/9 1.00/3 38053266 C T True 1 0.6 0.0 False True 0.50/4 0.50/2 0.50/2 1.00/2 0.00/3 0.00/1 38053303 G C True 1 0.0 0.077 0.0 False False 0.00/4 0.00/2 0.25/4 0.00/4 0.00/3 0.00/8 0.00/6 0.00/6 0.00/2 38053305 A C True 6 0.75 0.333 0.76 False False 0.75/4 0.00/5 0.83/6 0.40/5 0.00/5 1.00/9 0.62/8 0.50/6 1.00/2 38053315 A G True 1 0.0 0.067 0.0 False False 0.00/4 0.00/5 0.00/3 0.25/4 0.00/3 0.00/9 0.00/8 0.00/7 0.00/2 38053322 G C True 1 0.0 0.091 0.0 False False 0.00/4 0.00/2 0.00/2 0.25/4 0.00/3 0.00/7 0.00/6 0.00/6 0.00/2 38053323 G A True 1 0.0 0.5 0.0 True True 0.00/4 0.00/1 0.00/2 0.50/4 1.00/3 0.00/7 0.00/6 0.00/6 0.00/2 38053324 A T True 1 0.0 0.077 0.0 False False 0.00/5 0.00/3 0.00/3 0.25/4 0.00/3 0.00/9 0.00/8 0.00/7 0.00/2 38053326 A C True 1 0.0 0.462 0.0 False False 0.00/5 0.00/3 0.33/3 0.75/4 0.67/3 0.00/9 0.00/8 0.00/7 0.00/2 38053327 G T True 1 0.0 0.1 0.0 False False 0.00/4 0.00/1 0.00/2 0.25/4 0.00/3 0.00/7 0.00/6 0.00/6 0.00/2 38053328 T A True 1 0.0 0.154 0.0 False False 0.00/5 0.00/3 0.33/3 0.25/4 0.00/3 0.00/9 0.00/8 0.00/7 0.00/2 38053330 T A True 1 0.0 0.333 0.0 False False 0.00/5 0.00/3 0.00/2 0.25/4 1.00/3 0.00/9 0.00/8 0.00/7 0.00/3 38053337 G A True 0 0.0 0.5 0.0 True True 0.00/4 0.00/1 0.00/2 0.50/2 1.00/3 0.00/8 0.00/6 0.00/4 0.00/2 38053343 G A True 0 0.0 0.571 0.0 False True 0.00/4 1.00/1 0.00/1 0.50/2 0.67/3 0.00/8 0.00/6 0.00/5 0.00/2 38053354 A G True 1 0.0 0.182 0.0 False False 0.00/5 0.00/3 0.00/2 0.00/2 0.50/4 0.00/10 0.00/7 0.00/6 0.00/3 38053356 T A True 1 0.0 0.1 0.0 False False 0.00/5 0.00/3 0.00/2 0.00/1 0.25/4 0.00/10 0.00/7 0.00/6 0.00/3 38053359 A T True 1 0.0 0.1 0.0 False False 0.00/5 0.00/3 0.00/2 0.00/1 0.25/4 0.00/10 0.00/7 0.00/6 0.00/3 38053474 C T True 1 0.0 0.556 False True 0.00/1 0.00/2 0.00/1 0.00/3 1.00/4 0.00/2 0.33/3 38053503 G T True 1 0.0 0.0 0.111 False False 0.00/9 0.00/4 0.00/2 0.00/4 0.25/4 0.00/1 0.00/2 0.00/2 38053512 T G True 5 0.556 0.056 0.368 False False 0.56/9 0.00/6 0.25/4 0.00/8 0.33/9 0.00/1 0.50/4 0.40/5 38053614 T A True 4 0.455 0.154 0.789 True False 0.45/11 0.00/6 0.00/3 0.44/9 0.00/8 1.00/8 0.60/5 0.33/3 1.00/3 38053655 G T True 3 0.5 0.143 0.636 False False 0.50/6 0.00/4 0.33/3 0.33/3 0.00/4 1.00/4 0.33/3 0.50/4 38053680 G C True 1 0.0 0.071 0.0 False False 0.00/5 0.25/4 0.00/3 0.00/3 0.00/4 0.00/2 0.00/3 0.00/3 38053693 C A True 2 0.6 0.3 0.8 True False 0.60/5 0.00/2 0.33/3 1.00/2 0.00/3 1.00/6 0.67/3 0.67/3 0.67/3 38053699 A C True 1 0.0 0.045 0.0 False False 0.00/10 0.25/4 0.00/5 0.00/6 0.00/7 0.00/7 0.00/5 0.00/5 0.00/3 38053702 T C True 1 0.0 0.045 0.0 False False 0.00/11 0.25/4 0.00/5 0.00/6 0.00/7 0.00/8 0.00/5 0.00/6 0.00/3 38053708 T C True 1 0.0 0.05 0.043 False False 0.00/9 0.25/4 0.00/5 0.00/5 0.00/6 0.00/8 0.00/5 0.17/6 0.00/4 38053709 T C True 1 0.0 0.05 0.0 False False 0.00/9 0.25/4 0.00/5 0.00/5 0.00/6 0.00/8 0.00/5 0.00/6 0.00/3 38053710 T C True 1 0.0 0.053 0.0 False False 0.00/9 0.25/4 0.00/5 0.00/5 0.00/5 0.00/8 0.00/5 0.00/6 0.00/4 38053754 A T True 1 0.0 0.059 0.0 False False 0.00/9 0.25/4 0.00/5 0.00/6 0.00/2 0.00/8 0.00/5 0.00/6 0.00/6 38053755 A T True 1 0.0 0.059 0.0 False False 0.00/9 0.25/4 0.00/5 0.00/6 0.00/2 0.00/7 0.00/6 0.00/6 0.00/6 38053860 T A True 1 0.0 0.0 0.045 False False 0.00/7 0.00/5 0.00/2 0.00/4 0.00/7 0.25/4 0.00/4 0.00/6 0.00/8 38053863 T A True 5 0.333 0.158 0.364 False False 0.33/6 0.00/5 0.50/2 0.50/4 0.00/8 0.50/4 0.00/4 0.50/6 0.38/8 38053876 T A True 1 0.25 0.053 0.056 False False 0.25/8 0.00/5 0.50/2 0.00/4 0.00/8 0.33/3 0.00/3 0.00/5 0.00/7 38053881 T C True 1 0.0 0.0 0.059 False False 0.00/8 0.00/5 0.00/2 0.00/4 0.00/8 0.00/3 0.00/3 0.25/4 0.00/7 38053914 G A True 0 0.0 0.25 False True 0.00/1 0.00/1 0.00/5 1.00/1 0.00/1 0.00/1 0.00/1 38053930 A G True 2 0.0 0.357 0.2 False False 0.00/7 0.00/5 0.50/2 0.00/1 0.67/6 0.00/5 0.50/2 0.00/1 0.29/7 38053932 G C True 0 0.0 0.25 False False 0.00/1 0.00/1 0.00/4 1.00/1 0.00/1 0.00/2 38053951 G T True 0 0.4 False False 0.00/1 0.00/1 1.00/1 0.33/3 0.00/1 0.00/2