Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 18
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    20.0     10        0    3.4
Qui1     Qui    45.3     86        0   17.7
Qui2     Qui    84.8     33        0    6.5
Qui3     Qui              0        0    1.4
Qui4     Qui    53.3     15        0    6.0
Rio1     Rio     5.6     90        0   17.8
Rio2     Rio     0.0     29        0    6.8
Rio3     Rio    31.4     35        0    7.9
Rio4     Rio     0.0     60        0   12.3