Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 49
  seen in >= 2 oysters: 7
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

13 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    73.7     19        0    7.4
Qui1     Qui    45.5     11        0    5.7
Qui2     Qui    38.1     21        0    6.3
Qui3     Qui    65.6     32        0    7.8
Qui4     Qui    61.9     21        0    3.7
Rio1     Rio     0.0     10        1    4.8
Rio2     Rio    30.8     13        0    4.6
Rio3     Rio    33.3      3        1    3.8
Rio4     Rio    37.5     24        1    9.5