Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 12
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    14.3      7        0    1.4
Qui1     Qui     0.0     13        0    2.0
Qui2     Qui     0.0     30        0    4.8
Qui3     Qui     0.0     23        0    5.7
Qui4     Qui     2.2     46        0    3.5
Rio1     Rio    50.0     12        0    3.8
Rio2     Rio    50.0     16        0    3.7
Rio3     Rio    14.3     28        0    3.2
Rio4     Rio    36.8     19        0    4.0