Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 32 seen in >= 2 oysters: 1 differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0 [CpG-destroying: 0] 24 CpGs in target sample pop meth% calls CtoT_snp depth Pum1 Pum 1.9 106 0 7.4 Qui1 Qui 15.7 89 0 8.1 Qui2 Qui 45.9 111 0 6.5 Qui3 Qui 17.0 141 0 8.9 Qui4 Qui 14.1 71 0 5.5 Rio1 Rio 0.6 163 0 8.4 Rio2 Rio 1.9 105 0 10.1 Rio3 Rio 1.2 83 0 5.5 Rio4 Rio 1.6 129 0 9.5