Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 28
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    70.6     34        1    9.1
Qui1     Qui    53.7     41        0    7.3
Qui2     Qui    38.5     26        0    7.0
Qui3     Qui    59.1     22        0    8.0
Qui4     Qui    37.9     29        0    8.0
Rio1     Rio    57.1     35        0    8.6
Rio2     Rio    66.7     15        0    7.4
Rio3     Rio    77.4     31        0    9.0
Rio4     Rio    48.6     35        0    7.9