Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

9 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    74.5     55        0    7.6
Qui1     Qui     0.0     30        0    7.7
Qui2     Qui    61.8     68        0    8.4
Qui3     Qui    53.8     52        0   11.6
Qui4     Qui    28.6     49        0    6.9
Rio1     Rio    18.9     53        0   10.2
Rio2     Rio     5.9     51        0    9.0
Rio3     Rio    10.9     46        0    7.4
Rio4     Rio     4.8     62        0    8.1