Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 41
  seen in >= 2 oysters: 15
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    27.3     11        0    8.3
Qui1     Qui    31.6     19        0    7.4
Qui2     Qui    25.0     32        0   12.5
Qui3     Qui    18.2     33        0   13.7
Qui4     Qui    20.0     25        0    7.2
Rio1     Rio    50.0     16        0    9.8
Rio2     Rio    50.0     10        0    5.5
Rio3     Rio    48.4     31        0   11.0
Rio4     Rio    46.7     15        0   12.8