Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 31
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

20 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     5.8     69        0    4.2
Qui1     Qui     0.0      4        0    3.6
Qui2     Qui    70.0     80        0    5.2
Qui3     Qui    54.1     98        0    7.0
Qui4     Qui    74.7     75        0    6.3
Rio1     Rio     6.8     59        0    6.3
Rio2     Rio    11.3     71        0    6.5
Rio3     Rio     4.7     64        0    4.2
Rio4     Rio    21.6     51        0    3.6