Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 28
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

25 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    66.7     33        1    3.8
Qui1     Qui     0.0     16        0    1.1
Qui2     Qui    99.0     99        0    8.7
Qui3     Qui    94.4    108        0    6.2
Qui4     Qui    75.0     32        0    4.5
Rio1     Rio    95.7     46        0    3.6
Rio2     Rio    93.5     31        0    3.0
Rio3     Rio              0        0    0.5
Rio4     Rio    72.1     43        0    5.6