Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 30
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    45.7     35        0   14.5
Qui1     Qui    57.4     68        0   13.5
Qui2     Qui    50.0     52        0   17.6
Qui3     Qui    46.9     32        0    8.6
Qui4     Qui    35.9     39        0    9.4
Rio1     Rio    20.5     44        1   16.4
Rio2     Rio    40.0     30        0   13.1
Rio3     Rio    29.4     17        0    8.6
Rio4     Rio    25.0     52        0   14.7