Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 29
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     38        0   10.4
Qui1     Qui    37.1     35        0    8.6
Qui2     Qui    41.9     43        0   11.6
Qui3     Qui    25.8     31        0    9.2
Qui4     Qui    15.8     38        0    8.0
Rio1     Rio     3.2     31        0   11.3
Rio2     Rio    11.4     35        0    9.3
Rio3     Rio     0.0     35        0    7.8
Rio4     Rio     2.0     51        0   12.4