Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 12
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

9 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    85.3     34        0    9.9
Qui1     Qui    51.4     35        0    7.1
Qui2     Qui    69.6     23        0    8.7
Qui3     Qui    46.2     26        0    9.5
Qui4     Qui    50.0     14        0    7.2
Rio1     Rio    72.2     18        0   10.5
Rio2     Rio    64.3     28        0    9.8
Rio3     Rio    75.0     20        0    8.5
Rio4     Rio    82.5     40        0   11.6