Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 31
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

20 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     6.5     31        0    6.1
Qui1     Qui    12.1     58        0    4.8
Qui2     Qui    18.0     61        1    6.5
Qui3     Qui     7.1     56        1    5.7
Qui4     Qui     5.9     51        0    3.9
Rio1     Rio    62.3     77        0    9.5
Rio2     Rio    65.6     93        0    8.9
Rio3     Rio    56.3     87        0    6.6
Rio4     Rio    70.2     94        0    7.3