Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 37
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    57.0     86        0   10.8
Qui1     Qui    16.2     37        0    5.9
Qui2     Qui    29.8     57        0    6.5
Qui3     Qui    25.0     48        0    7.5
Qui4     Qui    24.6     65        0    7.6
Rio1     Rio    55.0     40        0    6.1
Rio2     Rio    37.5     24        0    5.0
Rio3     Rio    38.1     42        0    4.9
Rio4     Rio    40.0     70        0    8.5