Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 10
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    53.8     39        0    9.3
Qui1     Qui    40.0     50        0    9.4
Qui2     Qui    34.8     46        0    8.1
Qui3     Qui    26.4     53        1   10.6
Qui4     Qui    24.3     37        0    8.4
Rio1     Rio    34.8     23        0    9.6
Rio2     Rio    54.8     42        1    8.9
Rio3     Rio    46.7     30        0    7.4
Rio4     Rio    52.6     57        0   12.5