Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    63.0     27        0    5.4
Qui1     Qui    59.6     47        0    5.8
Qui2     Qui    47.8     46        1    8.0
Qui3     Qui    70.7     41        1    8.2
Qui4     Qui    38.9     18        0    3.7
Rio1     Rio    82.2     45        1    7.0
Rio2     Rio    76.2     21        1    6.9
Rio3     Rio    40.0     30        0    5.3
Rio4     Rio    86.9     61        0    6.8