Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 39
  seen in >= 2 oysters: 7
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

20 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    11.3    168        0   12.0
Qui1     Qui     0.0     74        0    6.1
Qui2     Qui     5.6    144        0    8.5
Qui3     Qui     6.6    106        0    7.3
Qui4     Qui     4.8    146        0    8.2
Rio1     Rio    26.5    162        0    9.2
Rio2     Rio    20.2     94        0    7.3
Rio3     Rio    32.3    124        0    7.7
Rio4     Rio    34.4    125        0    8.3