Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 35
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    40.6    133        0   11.2
Qui1     Qui     1.0     96        0    7.0
Qui2     Qui     1.9    106        0    7.9
Qui3     Qui     0.9    117        0    8.4
Qui4     Qui     3.6     83        0    5.5
Rio1     Rio    44.3    115        0   11.1
Rio2     Rio    33.8     65        0    7.8
Rio3     Rio    56.1    107        0    8.0
Rio4     Rio    59.7    129        0   10.1