Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    59.1     44        0   11.3
Qui1     Qui    14.3     21        0    5.2
Qui2     Qui     0.0      8        0    7.3
Qui3     Qui     0.0      8        0    5.1
Qui4     Qui     6.7     30        0    7.9
Rio1     Rio    64.3     28        0    7.7
Rio2     Rio    77.5     40        0    7.7
Rio3     Rio    47.2     36        0    6.5
Rio4     Rio    58.8     34        0    7.6