Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 49
  seen in >= 2 oysters: 5
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     21        0    5.8
Qui1     Qui    95.1     41        0    5.1
Qui2     Qui    96.2     52        0    7.0
Qui3     Qui    91.5     47        0    9.7
Qui4     Qui    86.3     51        0    7.2
Rio1     Rio    44.4     54        0   11.9
Rio2     Rio     0.0     36        0    6.6
Rio3     Rio     0.0     48        0    8.8
Rio4     Rio     0.0     37        0    8.9