Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 48
  seen in >= 2 oysters: 25
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    63.6     88        0   12.9
Qui1     Qui    51.8     56        0    9.0
Qui2     Qui    69.8     53        0   10.7
Qui3     Qui    48.9     88        0   12.1
Qui4     Qui    61.1    108        0    9.1
Rio1     Rio    97.4     39        0    8.5
Rio2     Rio    75.0     40        0    6.6
Rio3     Rio    80.8     26        0    3.8
Rio4     Rio    86.4     66        0    9.5