Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    43.2     44        0    8.8
Qui1     Qui    19.1     47        0    6.7
Qui2     Qui    22.9     48        0    6.8
Qui3     Qui    35.0     40        0    8.1
Qui4     Qui    52.9     17        0    5.6
Rio1     Rio    48.5     68        0   11.6
Rio2     Rio    41.7     36        0    7.7
Rio3     Rio    51.0     49        0    8.7
Rio4     Rio    49.1     53        0    9.4